Changes in Postural Syntax Characterize Sensory Modulation and Natural Variation of C. elegans Locomotion
- Roland F. Schwarz
- Robyn Branicky
- LGLaura J Grundy
- William R Schafer
- André EX Brown
- LGLaura J Grundy
- LGLaura J Grundy
PLoS Computational Biology · 2015 · Public Library of Science
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Abstract
Locomotion is driven by shape changes coordinated by the nervous system through time; thus, enumerating an animal's complete repertoire of shape transitions would provide a basis for a comprehensive understanding of locomotor behaviour. Here we introduce a discrete representation of behaviour in the nematode C. elegans. At each point in time, the worm's posture is approximated by its closest matching template from a set of 90 postures and locomotion is represented as sequences of postures. The frequency distribution of postural sequences is heavy-tailed with a core of frequent behaviours and a much larger set of rarely used behaviours. Responses to optogenetic and environmental stimuli can be quantified as changes in postural syntax: worms show different preferences for different sequences of postures drawn from the same set of templates. A discrete representation of behaviour will enable the use of methods developed for other kinds of discrete data in bioinformatics and language processing to be harnessed for the study of behaviour.
